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Overview

Standard Model Bio is currently the supported foundation model in Reverie. It is designed for EHR data and expects MEDS-format events.

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Required Data Format

ColumnTypeDescription
subject_idstring/intPatient identifier
timedatetimeEvent timestamp
codestringClinical code (ICD-10, RxNorm, LOINC, etc.)
Example: 
subject_id,time,code
patient_001,2023-01-15,ICD10:E11.9
patient_001,2023-01-15,RxNorm:860975
patient_002,2023-03-10,ICD10:I10

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Labels

Provide one row per patient: 
subject_id,label
patient_001,0
patient_002,1

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Run With This Model

Use Web UI: 
reverie ui
Use CLI: 
reverie train \
    --model standard-model \
    --data ./data/synthetic_data.parquet \
    --labels ./data/synthetic_labels.csv \
    --label-column label \
    --output ./results
More foundation models will be added in future releases.